Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948566.1_cds_XP_016489790.1_80278
CDS Infomation

[gene=LOC107809649] [db_xref=GeneID:107809649] [protein=protein trichome birefringence-like 33] [protein_id=XP_016489790.1] [location=complement(join(3121..3452,4972..4982,5025..5180,5271..5464,5564..5735,5823..6036,8456..8852))] [gbkey=CDS]
Sequence

ATGGGGTATGTGTGTGTGAAGGGTTCATGGGTCAAGAAACAAGAAAGTGATGTCAAGACT
GCTCATACAGACTCTAAGCCCAAACCTTCTACTTCCCATCCTAGCCTTAGTGACTCTGAC
CTTGCTGAGAAAATTAGCGCAATTGGCAATCATCTCTTTGCAATCAAAGATCTTCTCATT
GCCACCCAGTCCACTATTGGTACCATTCATGCTATCTCCAAGGAAACAGGGTCTGATGTC
TCCAAGATACGGGTTGCAGTTCTCAGAGTAAGGGAAAATGCTGTCAAGGCTTTCAAAGAG
GTTCATGACATGCTTGATGGAATGAGTGTCTCAGCAAACGCTAGCTTTGATCTACTAAAG
GAGGCCATCTGCAACACTCTTACCTATTTTCTGCGTCAGAAGAACAAGGAGAAGTTACCA
TTTGCCATAGGAGAGACAGAGAAAGGATGCGATATATTCAGTGGGAAATGGGTTTGGGAC
GAGAATCGGCCTTTGTATGAAGAATCAGAGTGTCCGTACATAACGCCACAGTCGACTTGC
CAAGAACATGGCAGGCCAGATAAAGACTATCAGCATTGGAGATGGCAACCTCATAGTTGC
TCTCTCCCGAGTTTCAATGCGACATTAATGGTGGAAACACTTCGGGGGAAGAGGATGTTG
TTCGTAGGCGATTCGTTGAACAGAGGACAATATATTTCCATGATTTGTCTTGTTCATAGA
CTGATTCCTGAGAATGCTAAATCCATCGAAAATGATGGTAATTTCGCCATTTTCACCATT
AAGGATTATAATGCAACGATTGAGTTCTACTGGGCACCATTTCTTCTGGAATCAAATTCT
GATGCTGCAATCACACATAGGATTGTTGAAAGAGTTGTTCGAAATGGTTCAATTGATGTA
CATGGGAAATATTGGAAAGGGTCTGACATAATTGTGTTCGATACTTACCTTTGGTGGCTG
AGCAATTTTAGTATCTTACAAGGGTCTTTTGACGATGAAGTGAAAGATATAGTCGAGGTG
TCCACAGAGAATGCATATCGCATGGTAATGAAGAGTATGTTGAGTTGGATTAAAGAGCAT
ATGANACCCCCCACCCCAAAAAAAAATTTTCTCATCTCCTTACCTTTTTGTATAAAAGGA
AAACAATGGGGAGGTGAACCAAATAAGAATTGTTTCAATGAGACTAAAATGATAGATGAT
CCAAATTATTGGGCAACAGATAGTAGAAAAAGCATAATGCATGTGATTGATGAAGAATTT
GGCAAATCAAAAGTTCCCATCTCATTTCTCAATATCACTCAGCTCTCAAGTTATAGAAAA
GACGCACACTCGTCAATTTACAAGAAACATTGGAATCCATTAACGCCAAAGCAACTAGCA
AACCCTTCCAGCTATGCTGATTGTGTTCATTGGTGCTTGCCTGGGCTTCCAGATACTTGG
AACGAACTTTTATTTGCCAAGCTTTTCTATCTTTGA

Peptide Sequence

PEP ID

XP_016489790.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 33 [Nicotiana tabacum]
Sequence

MGYVCVKGSWVKKQESDVKTAHTDSKPKPSTSHPSLSDSDLAEKISAIGNHLFAIKDLLI
ATQSTIGTIHAISKETGSDVSKIRVAVLRVRENAVKAFKEVHDMLDGMSVSANASFDLLK
EAICNTLTYFLRQKNKEKLPFAIGETEKGCDIFSGKWVWDENRPLYEESECPYITPQSTC
QEHGRPDKDYQHWRWQPHSCSLPSFNATLMVETLRGKRMLFVGDSLNRGQYISMICLVHR
LIPENAKSIENDGNFAIFTIKDYNATIEFYWAPFLLESNSDAAITHRIVERVVRNGSIDV
HGKYWKGSDIIVFDTYLWWLSNFSILQGSFDDEVKDIVEVSTENAYRMVMKSMLSWIKEH
MXPPTPKKNFLISLPFCIKGKQWGGEPNKNCFNETKMIDDPNYWATDSRKSIMHVIDEEF
GKSKVPISFLNITQLSSYRKDAHSSIYKKHWNPLTPKQLANPSSYADCVHWCLPGLPDTW
NELLFAKLFYL

Transcript Sequence

Gene sequence data has not been registered.